Structural Interactome Map of all Proteins


 PSIbase is a molecular interaction database. 
   It focuses on structural interaction of proteins and their domains. 
   It is based on PSIMAP that is a map of protein interactome. 
   It covers the interaction of all known 3D protein structures. 
   Presently, PSIMAP is based on PDB and SCOP databases. 
   It is also the first protocol that has mapped large-scale 
   structural interactions and that used protein families.
 
     -read about the concept and assumptions of PSIMAP
     -for PSIMAP home page, use this link.
	
 Search Interacting partners in PSIMAP: [Look up]
 
 Download PSIMAP Data: 

  Currently, PSIMAP has three versions based on how the PSIMAPs are generated.

  FAC PSIMAP is Sampled Atomic Contact PSIMAP.
 
  lastest release 20050920

     FAC PSIMAP Build3 [psimap superfamily | psimap family | rawfiles | document]
     PSIMAP Database   [ download ] 

Download PDB-ISL and their Profiles here

  Data Used: 
              SCOP [release 1.69]
              PDB   [20050920]

  News:
       20050920  PSIBASE Build3 Update 
       20050520  PSIBASE Build2 Update
       20050320  Protein interface database is available now. Visit InterPare.
       20050210  New comers are recommended to read the up-to-date Help page.
       20041009  Protein interface can be viewed using Chime, JMol, and the Interfacer by Hansol Choi.
       20040701  PSIBASE was launched by OITEK Inc.


Related links:

Newton Inst. poster by Dan Bolser